Source code for ALLCools.sandbox.igv.defaults

[docs]DATARANGE_DEFAULT = {
    "baseline": "0.0",
    "drawBaseline": "true",
    "flipAxis": "false",
    "maximum": "1.0",
    "minimum": "0.0",
    "type": "LINEAR",
}

[docs]DATA_TRACK_DEFAULT = {
    "altColor": "51,153,0",
    "autoScale": "false",
    "color": "51,153,0",
    "fontSize": "10",
    "height": "30",
    "renderer": "BAR_CHART",
    "visible": "true",
    "windowFunction": "mean",
}

[docs]FEATURE_TRACK_DEFAULT = {
    "color": "0,0,178",
    "featureVisibilityWindow": "2147483647",
    "fontSize": "10",
    "height": "10",
    "visible": "true",
    "displayMode": "SQUISHED",
}

[docs]TRACK_REQUIRED_KEYS = ["id", "name"]

[docs]TABLE_REQUIRED_FIELDS = ["name", "path", "file_format", "addToSession", "panel"]

[docs]FEATURE_TRACK_FORMATS = ["bed"]