ALLCools.plot.dendro
Contents
ALLCools.plot.dendro
¶
Module Contents¶
- plot_dendrogram(linkage_df, ax, dendro=None, labels=None, dendro_kws=None, plot_node_id=False, plot_non_singleton=True, plot_kws=None, node_hue=None, node_hue_norm=None, node_hue_cbar=True, node_hue_cbar_frac=0.1, node_palette='viridis', node_size=None, node_size_norm=None, node_sizes=None, line_hue=None, line_hue_norm=None, line_palette='gray_r', linewidth=1.5, edge_color='gray', marker_size=60, marker_color='lightblue')[source]¶
- Parameters
linkage_df –
dendro –
labels –
dendro_kws –
ax –
plot_node_id –
plot_non_singleton –
plot_kws –
node_hue –
node_hue_norm –
node_hue_cbar –
node_hue_cbar_frac –
node_palette –
node_size –
node_size_norm –
node_sizes –
line_hue –
line_hue_norm –
line_palette –
linewidth –
edge_color –
marker_size –
marker_color –