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ALLCools.sandbox.igv.BaseClass

ALLCools.sandbox.igv.BaseClass

See IGV doc about xml, but this doc is actually out-of-date… https://software.broadinstitute.org/software/igv/Sessions

I learn this by save IGV session xml file from IGV 2.17.2 These session file is not in a stable API, use it cross IGV version do cause problems…

Module Contents

class Resources[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class Resource(path)[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class Panel(**kwargs)[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class Track(**kwargs)[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class DataRange(**kwargs)[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class PanelLayout(dividerFractions=0.9)[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

class HiddenAttributes[source]

Bases: xml.etree.ElementTree.Element

An XML element.

This class is the reference implementation of the Element interface.

An element’s length is its number of subelements. That means if you want to check if an element is truly empty, you should check BOTH its length AND its text attribute.

The element tag, attribute names, and attribute values can be either bytes or strings.

tag is the element name. attrib is an optional dictionary containing element attributes. extra are additional element attributes given as keyword arguments.

Example form:

<tag attrib>text<child/>…</tag>tail

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