Contents

ALLCools.sandbox.igv.make_session

ALLCools.sandbox.igv.make_session

  • Input: a tsv file that contain layout settings and file information

  • Validate all params

  • Make a session object

  • Output: IGV session XML

Module Contents

hex_to_rgb_text(color_code)[source]
sort_df_by_order_dict(df, order_dict)[source]
make_session(track_table, output_xml_path, hue=None, palette=None, range_key_col=None, data_range_dict=None, genome='mm10', locus='Gad1', open_in_igv=True)[source]

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